Domains

CATH

PDB Entries

PDB ID OPM Mutant Chain Formula Resolution HETNAM
Amino Acid sequence SCOPe Family Level CATH Homology Level
1akz[A][A][A]1.57
1emh[A](AB)[A](AB)[A](AB)1.8
P2U:2___sq___-DEOXY-PSEUDOURIDINE-5___sq___MONOPHOSPHATE
1emj[A](AB)[A](AB)[A](AB)2
ASU:4___sq___-THIO-2___sq___4___sq___-DIDEOXYRIBOFURANOSE-5___sq___-PHOSPHATE
URA:URACIL
1eug[A][A][A]1.6
1eui[A2B2][A2B2][A2B2]3.2
1flz[A][A][A]2.3
URA:URACIL
1l9g[A][A][A]2.5
SF4:IRON/SULFUR CLUSTER
SO4:SULFATE ION
1lau[A](A)[A](A)[A](A)1.8
1lqg[AB][AB][AB]2.9
1lqj[A][A][A]3.35
1lqm[AB][AB][AB]3.2
1mtl[A2](A2)[A2](A2)[A2](A2)2.8
AAB:2___sq___-DEOXY-RIBOFURANOSE-5___sq___-MONOPHOSPHATE
1mug[A][A][A]1.8
SO4:SULFATE ION
1mwi[A](A)[A](A)[A](A)2.35
AAB:2___sq___-DEOXY-RIBOFURANOSE-5___sq___-MONOPHOSPHATE
1mwj[A](A)[A](A)[A](A)2.85
1oe4[A2](AB)[A2](AB)[A2](AB)2
3DR:1___sq___,2___sq___-DIDEOXYRIBOFURANOSE-5___sq___-PHOSPHATE
GOL:GLYCEROL
IPA:ISOPROPYL ALCOHOL
1oe5[A2](AB)[A2](AB)[A2](AB)2.3
3DR:1___sq___,2___sq___-DIDEOXYRIBOFURANOSE-5___sq___-PHOSPHATE
DUR:2___sq___-DEOXYURIDINE
EPE:4-(2-HYDROXYETHYL)-1-PIPERAZINEETHANESULFONIC ACID
GOL:GLYCEROL
IPA:ISOPROPYL ALCOHOL
URA:URACIL
1oe6[A2](AB)[A2](AB)[A2](AB)2.65
3DR:1___sq___,2___sq___-DIDEOXYRIBOFURANOSE-5___sq___-PHOSPHATE
GOL:GLYCEROL
HMU:5-HYDROXYMETHYL URACIL
IPA:ISOPROPYL ALCOHOL
1okb[A][A][A]1.9
CL:CHLORIDE ION
GOL:GLYCEROL
1q3f[A](AB)[A](AB)[A](AB)1.9
NRI:PHOSPHORIC ACID MONO-(4-HYDROXY-PYRROLIDIN-3-YLMETHYL)ESTER
PO4:PHOSPHATE ION
URA:URACIL
1ssp[A](AB)[A](AB)[A](AB)1.9
ORP:2-DEOXY-5-PHOSPHONO-RIBOSE
URA:URACIL
1udg[A][A][A]1.75
SO4:SULFATE ION
1udh[A][A][A]1.75
SO4:SULFATE ION
URA:URACIL
1udi[AB][AB][AB]2.7
1ugh[AB][AB][AB]1.9
1ui0[A][A][A]1.5
SF4:IRON/SULFUR CLUSTER
SO4:SULFATE ION
URA:URACIL
1ui1[A][A][A]2.8
MSE:SELENOMETHIONINE
SF4:IRON/SULFUR CLUSTER
1uug[AB][AB][AB]2.4
1vk2[A][A][A]1.9
MSE:SELENOMETHIONINE
SF4:IRON/SULFUR CLUSTER
UNL:UNKNOWN LIGAND
1wyw[AB][AB][AB]2.1
CL:CHLORIDE ION
MG:MAGNESIUM ION
NA:SODIUM ION
1yuo[A][A][A]1.95
2boo[A][A][A]1.8
NO3:NITRATE ION
2c2p[A][A][A]1.75
ACT:ACETATE ION
2c2q[A][A][A]1.7
ACT:ACETATE ION
2c53[A][A][A]1.8
DUR:2___sq___-DEOXYURIDINE
GOL:GLYCEROL
2c56[A][A][A]2.1
FRU:BETA-D-FRUCTOFURANOSE
GLC:ALPHA-D-GLUCOPYRANOSE
2d07[AB][AB][AB]2.1
2d3y[A][A][A]1.55
ACT:ACETATE ION
DU:2___sq___-DEOXYURIDINE-5___sq___-MONOPHOSPHATE
SF4:IRON/SULFUR CLUSTER
2ddg[A](AB)[A](AB)[A](AB)2.1
2HP:DIHYDROGENPHOSPHATE ION
ACT:ACETATE ION
EOH:ETHANOL
GOL:GLYCEROL
ORP:2-DEOXY-5-PHOSPHONO-RIBOSE
SF4:IRON/SULFUR CLUSTER
2dem[A](AB)[A](AB)[A](AB)1.95
2HP:DIHYDROGENPHOSPHATE ION
EOH:ETHANOL
GOL:GLYCEROL
ORP:2-DEOXY-5-PHOSPHONO-RIBOSE
SF4:IRON/SULFUR CLUSTER
2dp6[A](AB)[A](AB)[A](AB)1.8
2HP:DIHYDROGENPHOSPHATE ION
EOH:ETHANOL
GOL:GLYCEROL
ORP:2-DEOXY-5-PHOSPHONO-RIBOSE
SF4:IRON/SULFUR CLUSTER
2eug[A][A][A]1.5
URA:URACIL
2hxm[A][A][A]1.3
302:4-[(1E,7E)-8-(2,6-DIOXO-1,2,3,6-TETRAHYDROPYRIMIDIN-4-YL)-3,6-DIOXA-2,7-DIAZAOCTA-1,7-DIEN-1-YL]BENZOIC ACID
2j8x[AB][AB][AB]2.3
URE:UREA
2jhq[A][A][A]1.5
CL:CHLORIDE ION
2l3f[A][A][A]NOTAPPLICABLE.
2owq[A2][A2][A2]2.4
CL:CHLORIDE ION
GOL:GLYCEROL
IMD:IMIDAZOLE
SO4:SULFATE ION
2oxm[A](AB)[A](AB)[A](AB)2.5
4MF:1-(2-DEOXY-5-O-PHOSPHONO-BETA-D-ERYTHRO-PENTOFURANOSYL)-4-METHYL-1H-INDOLE
2oyt[A](AB)[A](AB)[A](AB)2
4MF:1-(2-DEOXY-5-O-PHOSPHONO-BETA-D-ERYTHRO-PENTOFURANOSYL)-4-METHYL-1H-INDOLE
AAB:2___sq___-DEOXY-RIBOFURANOSE-5___sq___-MONOPHOSPHATE
2rba[A2](AB)[A2](AB)[A2](AB)2.79
3DR:1___sq___,2___sq___-DIDEOXYRIBOFURANOSE-5___sq___-PHOSPHATE
2ssp[A](AB)[A](AB)[A](AB)2.25
AAB:2___sq___-DEOXY-RIBOFURANOSE-5___sq___-MONOPHOSPHATE
2uug[AB][AB][AB]2.6
2zhx[AB][AB][AB]3.1
3a7n[A][A][A]1.95
FLC:CITRATE ANION
3cxm[A][A][A]1.5
BR:BROMIDE ION
GOL:GLYCEROL
URA:URACIL
URB:5-BROMOPYRIMIDINE-2,4(1H,3H)-DIONE
3eug[A][A][A]1.43
GOL:GLYCEROL
3fcf[A][A][A]1.84
FCF:3-[(1E,7E)-8-(2,6-DIOXO-1,2,3,6-TETRAHYDROPYRIMIDIN-4-YL)-3,6-DIOXA-2,7-DIAZAOCTA-1,7-DIEN-1-YL]BENZOIC ACID
SCN:THIOCYANATE ION
3fci[A][A][A]1.27
3FI:3-{(E)-[(3-{[(2,6-DIOXO-1,2,3,6-TETRAHYDROPYRIMIDIN-4-YL)METHYL]AMINO}PROPOXY)IMINO]METHYL}BENZOIC ACID
NA:SODIUM ION
SCN:THIOCYANATE ION
3fck[A][A][A]1.64
FCK:3-({[3-({[(1E)-(2,6-DIOXO-1,2,3,6-TETRAHYDROPYRIMIDIN-4-YL)METHYLIDENE]AMINO}OXY)PROPYL]AMINO}METHYL)BENZOICACID
3fcl[A][A][A]1.7
3FL:3-{[(4-{[(2,6-DIOXO-1,2,3,6-TETRAHYDROPYRIMIDIN-4-YL)METHYL]AMINO}BUTYL)AMINO]METHYL}BENZOIC ACID
SCN:THIOCYANATE ION
3ikb[A][A][A]1.67
FLC:CITRATE ANION
MSE:SELENOMETHIONINE
3nt7[A2][A2][A2]2.4
GOL:GLYCEROL
SO4:SULFATE ION
3tkb[A][A][A]1.5
IMD:IMIDAZOLE
3tr7[A][A][A]2.2
MSE:SELENOMETHIONINE
3uf7[A][a2][A][a2][A][a2]1.2
SO4:SULFATE ION
3ufj[A2](AB)[A2](AB)[A2](AB)2.97
UF2:1-(2-DEOXY-2-FLUORO-5-O-PHOSPHONO-BETA-D-ARABINOFURANOSYL)PYRIMIDINE-2,4(1H,3H)-DIONE
3ufm[A][a][A][a][A][a]1.95
IOD:IODIDE ION
3uo7[A2](AB)[A2](AB)[A2](AB)3
1CC:5-CARBOXY-2___sq___-DEOXYCYTIDINE MONOPHOSPHATE
3uob[A2](AB)[A2](AB)[A2](AB)3.01
1FC:4-AMINO-1-(2-DEOXY-2-FLUORO-5-O-PHOSPHONO-BETA-D-ARABINOFURANOSYL)-2-OXO-1,2-DIHYDROPYRIMIDINE-5-CARBOXYLIC ACID
3wdf[A][A][A]1.48
3wdg[AB][AB][AB]2.2
3zoq[A2B][A2B][A2B]1.45
CL:CHLORIDE ION
GOL:GLYCEROL
3zor[A][A][A]2.95
4dof[A2][A2][A2]2.8
4dog[A2][A2][A2]2.3
EDO:1,2-ETHANEDIOL
SO4:SULFATE ION
4eug[A][A][A]1.4
4fnc[A](AB)[A](AB)[A](AB)2.49
AAB:2___sq___-DEOXY-RIBOFURANOSE-5___sq___-MONOPHOSPHATE
HMU:5-HYDROXYMETHYL URACIL
4irb[A2][A2][A2]2.3
CL:CHLORIDE ION
GOL:GLYCEROL
SO4:SULFATE ION
4jgc[A](AB)[A](AB)[A](AB)2.58
1RT:4-AMINO-2-OXO-1,2-DIHYDROPYRIMIDINE-5-CARBOXYLIC ACID
ORP:2-DEOXY-5-PHOSPHONO-RIBOSE
4l5n[A2B][A2B][A2B]2.16
ACT:ACETATE ION
4lyl[AB][AB][AB]1.93
4lzb[A2][A2][A2]2.03
CL:CHLORIDE ION
DMS:DIMETHYL SULFOXIDE
EDO:1,2-ETHANEDIOL
K:POTASSIUM ION
URA:URACIL
4od8[AB][AB][AB]1.85
GOL:GLYCEROL
SO4:SULFATE ION
4oda[AB][AB][AB]2.2
GOL:GLYCEROL
SO4:SULFATE ION
4qc9[A2][A2][A2]2.26
EDO:1,2-ETHANEDIOL
SO4:SULFATE ION
4qca[A2][A2][A2]1.9
CL:CHLORIDE ION
GOL:GLYCEROL
K:POTASSIUM ION
4qcb[A](A2)[A](A2)[A](A2)2.89
GOL:GLYCEROL
4skn[A](AB)[A](AB)[A](AB)2.9
ORP:2-DEOXY-5-PHOSPHONO-RIBOSE
URA:URACIL
4uqm[A](AB)[A](AB)[A](AB)1.35
AAB:2___sq___-DEOXY-RIBOFURANOSE-5___sq___-MONOPHOSPHATE
CL:CHLORIDE ION
GOL:GLYCEROL
4wpk[A][A][A]0.98
CIT:CITRIC ACID
NA:SODIUM ION
4wpl[A][A][A]1.15
ACT:ACETATE ION
CL:CHLORIDE ION
DMS:DIMETHYL SULFOXIDE
GOL:GLYCEROL
URA:URACIL
4wru[A][A][A]1.24
CL:CHLORIDE ION
GOL:GLYCEROL
URA:URACIL
4wrv[A][A][A]1.44
CL:CHLORIDE ION
URA:URACIL
4wrw[A][A][A]1.9
CL:CHLORIDE ION
GOL:GLYCEROL
4wrx[A][A][A]1.4
CL:CHLORIDE ION
4wry[A][A][A]1.43
CIT:CITRIC ACID
CL:CHLORIDE ION
URF:5-FLUOROURACIL
4wrz[A][A][A]1.19
CIT:CITRIC ACID
CL:CHLORIDE ION
IPA:ISOPROPYL ALCOHOL
URF:5-FLUOROURACIL
4ws0[A][A][A]1.97
CL:CHLORIDE ION
EDO:1,2-ETHANEDIOL
URF:5-FLUOROURACIL
4ws1[A][A][A]1.4
CL:CHLORIDE ION
EDO:1,2-ETHANEDIOL
URF:5-FLUOROURACIL
4ws2[A][A][A]1.13
6UA:6-AMINOPYRIMIDINE-2,4(3H,5H)-DIONE
CIT:CITRIC ACID
CL:CHLORIDE ION
DMS:DIMETHYL SULFOXIDE
IPA:ISOPROPYL ALCOHOL
4ws3[A][A][A]1.4
6UA:6-AMINOPYRIMIDINE-2,4(3H,5H)-DIONE
CL:CHLORIDE ION
DMS:DIMETHYL SULFOXIDE
4ws4[A][A][A]1.18
5NU:5-NITROURACIL
CIT:CITRIC ACID
CL:CHLORIDE ION
DMS:DIMETHYL SULFOXIDE
IPA:ISOPROPYL ALCOHOL
4ws5[A][A][A]1.4
5NU:5-NITROURACIL
CL:CHLORIDE ION
4ws6[A][A][A]1.1
CIT:CITRIC ACID
CL:CHLORIDE ION
DMS:DIMETHYL SULFOXIDE
EDO:1,2-ETHANEDIOL
IPA:ISOPROPYL ALCOHOL
WBU:5-AMINO-1H-PYRIMIDINE-2,4-DIONE
4ws7[A][A][A]1.88
5UC:5-CHLOROPYRIMIDINE-2,4(1H,3H)-DIONE
CL:CHLORIDE ION
EDO:1,2-ETHANEDIOL
4ws8[A][A][A]1.4
CL:CHLORIDE ION
TUL:2-THIOXO-2,3-DIHYDROPYRIMIDIN-4(1H)-ONE
4xeg[A](AB)[A](AB)[A](AB)1.72
ACY:ACETIC ACID
EDO:1,2-ETHANEDIOL
ORP:2-DEOXY-5-PHOSPHONO-RIBOSE
4ygm[AB][AB][AB]1.85
SO4:SULFATE ION
URA:URACIL
4yig[AB](AB)[AB](AB)[AB](AB)2.7
ORP:2-DEOXY-5-PHOSPHONO-RIBOSE
URA:URACIL
4z3a[A](AB)[A](AB)[A](AB)1.72
AAB:2___sq___-DEOXY-RIBOFURANOSE-5___sq___-MONOPHOSPHATE
ORP:2-DEOXY-5-PHOSPHONO-RIBOSE
4z47[A](AB)[A](AB)[A](AB)1.45
ACY:ACETIC ACID
EDO:1,2-ETHANEDIOL
ORP:2-DEOXY-5-PHOSPHONO-RIBOSE
4z7b[A](AB)[A](AB)[A](AB)2.02
ACY:ACETIC ACID
EDO:1,2-ETHANEDIOL
ORP:2-DEOXY-5-PHOSPHONO-RIBOSE
4z7z[A](AB)[A](AB)[A](AB)1.83
ACY:ACETIC ACID
EDO:1,2-ETHANEDIOL
ORP:2-DEOXY-5-PHOSPHONO-RIBOSE
4zbx[A][A][A]1.7
MES:2-(N-MORPHOLINO)-ETHANESULFONIC ACID
SF4:IRON/SULFUR CLUSTER
4zby[A][A][A]1.7
MES:2-(N-MORPHOLINO)-ETHANESULFONIC ACID
SF4:IRON/SULFUR CLUSTER
URA:URACIL
4zbz[A][A][A]1.9
GOL:GLYCEROL
MES:2-(N-MORPHOLINO)-ETHANESULFONIC ACID
SF4:IRON/SULFUR CLUSTER
5ayr[AB][AB][AB]2.4
MG:MAGNESIUM ION
5ays[AB][AB][AB]2.09
5cys[A](AB)[A](AB)[A](AB)2.45
ACY:ACETIC ACID
ORP:2-DEOXY-5-PHOSPHONO-RIBOSE
5eug[A][A][A]1.6
URA:URACIL
5ff8[A](AB)[A](AB)[A](AB)1.7
AAB:2___sq___-DEOXY-RIBOFURANOSE-5___sq___-MONOPHOSPHATE
5h93[A][A][A]2.18
5h98[A][A][A]2.04
5h99[A][A][A]2.5
5h9i[A][A][A]1.5
BME:BETA-MERCAPTOETHANOL
GOL:GLYCEROL
IPA:ISOPROPYL ALCOHOL
LEA:PENTANOIC ACID
XAN:XANTHINE
5hf7[A](AB)[A](AB)[A](AB)1.54
UF2:1-(2-DEOXY-2-FLUORO-5-O-PHOSPHONO-BETA-D-ARABINOFURANOSYL)PYRIMIDINE-2,4(1H,3H)-DIONE
5jk7[ABCD][ABCD][ABCD]3.49
5jkr[AB][AB][AB]2.6
SO4:SULFATE ION
5jks[AB][AB][AB]2.79
SO4:SULFATE ION
5jkt[AB][AB][AB]2.49
ACT:ACETATE ION
SO4:SULFATE ION
5jx0[A2][A2][A2]2.4
CL:CHLORIDE ION
GOL:GLYCEROL
5jx3[A2][A2][A2]2.3
CL:CHLORIDE ION
GOL:GLYCEROL
5jx8[A2][A2][A2]2
GOL:GLYCEROL
SO4:SULFATE ION
5jxy[A](AB)[A](AB)[A](AB)1.71
UF2:1-(2-DEOXY-2-FLUORO-5-O-PHOSPHONO-BETA-D-ARABINOFURANOSYL)PYRIMIDINE-2,4(1H,3H)-DIONE
5nn7[A][A][A]2.5
5nnh[A][A][A]2.2
SO4:SULFATE ION
5nnu[A](AB)[A](AB)[A](AB)2.97
AAB:2___sq___-DEOXY-RIBOFURANOSE-5___sq___-MONOPHOSPHATE
5t2w[A](AB)[A](AB)[A](AB)2.2
XFC:4-AMINO-1-(2-DEOXY-2-FLUORO-5-O-PHOSPHONO-BETA-D-ARABINOFURANOSYL)-2-OXO-1,2-DIHYDROPYRIMIDINE-5-CARBALDEHYDE
*Chain Formula of OLIGAMI.
  [ ] : Polypeptide - [AB] : Protein, [ab] : Small peptide
  ( ) : Nucleic acid - (AB) : DNA, (ab) : RNA
PDL